The latest orders against the group and its ship were issued on Monday, days after MSF helped 206 refugees disembark in Genoa, Italy on September 19.
After that rescue, the group received a distress alert from a plane that monitors the passage of asylum-seekers across the Mediterranean, where thousands of people have drowned in the past decade while attempting to reach Europe after fleeing violent conflicts, political unrest, and poverty.
The Italian Maritime Rescue Coordination Center gave the Geo Barents crew approval to proceed to the overcrowded wooden boat detected by the plane, which was holding around 110 people from Syria, Eritrea, Ethiopia, Somalia, and Egypt.
But as MSF was about to complete the rescue, with just 20 people left in the boat, a Libyan Coast Guard patrol boat that had been donated by Italy arrived at the scene.
"They arrived, threatened to shoot, and carried out unsafe and intimidating maneuvers around the people in distress and the MSF rescue team," said Fulvia Conte, search and rescue team leader for MSF.
The group said the order, which requires the Geo Barents to be detained at a port for 60 days, is based on "twisted logic" and MSF's "alleged failure to comply with instructions from unreliable and often dangerous Libyan coast guards," said Judith Sunderland, associate director of the Europe and Central Asia Division of Human Rights Watch, who was aboard the Geo Barents as it completed the rescue.
"It is a disgrace that the Italian authorities still consider the Libyan Coast Guard to be a reliable actor and source of information."
"People fleeing Libya often tell us about violent interceptions at sea carried out by the E.U.-backed Libyan Coast Guard," said Gil. "It has been documented by the United Nations and independent investigative journalists that the Libyan Coast Guard is complicit in serious human rights violations amounting to crimes against humanity, and collusion with smugglers and traffickers. It is a disgrace that the Italian authorities still consider the Libyan Coast Guard to be a reliable actor and source of information."
Sunderland noted that earlier this month, a judge lifted a previous 60-day detention order against the ship, with Italian authorities claiming MSF had caused "a dangerous situation by rescuing dozens of people from the water at night."
"The judge concluded the rescue had been 'urgent and unavoidable' and the detention jeopardized the organization's humanitarian objectives," wrote Sunderland.
Even though MSF had approval to complete the rescue on September 19, the first detention order was issued under the Piantedosi Decree, a law introduced in 2023 which requires non-governmental rescue ships to sail to the assigned port after a rescue, without picking up people from other boats in distress.
The second order was issued Monday following an in-depth inspection of Geo Barents by the Port State Control, which said it found eight technical deficiencies on the vessel.
Conte said such inspections "are another layer of administrative and technical instrumentalization of laws and regulations that the authorities have been using for the past seven years to obstruct the work of humanitarian search and rescue vessels in the Mediterranean."
"This one seems to have the intention to ensure we don't operate anytime soon," she said. "We are moving to quickly address these deficiencies and to go back to prevent deaths at sea."
Kenneth Roth, former executive director of HRW, said the latest orders suggest the Italian government is doing everything in its power "to stop NGO rescue ships from operating in the Mediterranean because rescuing migrants gets in the way of Italy's (and the E.U.'s) preferred approach of using the risk of drowning as a deterrent to migration."
MSF has helped rescue more than 91,000 people in search and rescue operations in the Mediterranean, including 12,540 people who have been saved by the Geo Barents crew since 2021.
U.N. special rapporteur on human rights defenders Mary Lawlor said in 2023 that the punishment and criminalization of people working to save refugees from drowning was "a darkening stain on Italy and the E.U.'s commitment to human rights," after the Italian authorities brought criminal charges for "aiding and abetting unauthorized immigration" against nearly two dozen rescue crew members and rights advocates.